Site Packages
For each Python version, LC supports a set of modules, also known as site-packages, generally beneficial to our user community. Our package selection process begins when a package is requested by a user. LC first studies if it can generally benefit the Python users on the LC machines before committing to install and maintain it. If it turns out to be too specific to the individual requester, we recommend that this user make a side-installation and add the installation path to their Python module search path via the PYTHONPATH environment variable, or that the user use virtualenv to manage their own Python environment (instructions for both options here). Users should not hesitate to ask the LC Hotline for specific packages, as it helps keep track of what users require. LC will also help with the installation if any issues arise when trying to build a pakcage for one's self.
In general, a python installation can be queried for the list of packages by running python -m pip list --format=columns. The information below is for TOSS 3, CORAL EA, and CORAL systems. Moving forward (i.e., TOSS 4, we will no longer publish the list here, but rather suggest the users run the above python -m pip list --format=columns command to see the full list for a given python installation.
TOSS 3 Python Version 2.7.13 Site Packages
The following site packages for Python version 2.7.13 (/usr/tce/packages/python/python-2.7.13/bin/python) on TOSS 3 systems:
[lee218@rzgenie2:~]$ date Tue Jul 25 15:20:03 PDT 2017 [lee218@rzgenie2:~]$ python-2.7.13 -m pip list --format=columns Package Version ----------------- -------- alabaster 0.7.9 astroid 1.4.5 Babel 2.3.4 basemap 1.0.7 biopython 1.65 Bottleneck 1.0.0 configparser 3.5.0 cycler 0.10.0 Cython 0.25.2 docutils 0.12 egenix-mx-base 3.2.8 enum34 1.1.6 epydoc 3.0.1 flake8 3.0.4 funcsigs 0.4 gist 2.1.7 gnuplot-py 1.8 h5py 2.6.0 imagesize 0.7.1 ipython 3.1.0 Jinja2 2.8 lazy-object-proxy 1.2.2 llvmlite 0.18.0 logilab-common 1.2.0 MarkupSafe 0.23 matplotlib 1.5.3 mccabe 0.5.2 mock 1.3.0 mpi4py 2.0.0 mpmath 0.19 netCDF4 1.2.3.1 nose 1.3.7 numba 0.33.0 numexpr 2.5 numpy 1.11.2 pandas 0.18.0 pbr 1.8.1 periodictable 1.4.1 pexpect 3.3 Pillow 3.2.0 pip 9.0.1 Pmw 2.0.0 psutil 5.0.1 py 1.4.31 pychecker 0.8.19 pycodestyle 2.0.0 pyflakes 1.2.3 Pygments 2.1.3 pylint 1.4.3 Pypar 2.1.5 pyparsing 2.0.3 PySide 1.2.2 pytest 3.0.2 python-dateutil 2.5.2 pytz 2016.6.1 PyYAML 3.11 requests 2.13.0 rpy2 2.5.6 ScientificPython 2.8.1 scikit-learn 0.17.1 scipy 0.18.1 setuptools 25.2.0 singledispatch 3.4.0.3 six 1.10.0 snowballstemmer 1.2.1 Sphinx 1.4.5 sphinx-rtd-theme 0.1.10a0 sympy 1.0 virtualenv 15.0.1 wheel 0.26.0 wrapt 1.10.8
TOSS 3 Python Version 2.7.14 Site Packages
The following site packages for Python version 2.7.14 (/usr/tce/packages/python/python-2.7.14/bin/python) on TOSS 3 systems:
[lee218@rzgenie5:~]$ date Thu May 10 13:04:54 PDT 2018 [lee218@rzgenie5:~]$ python-2.7.14 -m pip list --format=columns Package Version ---------------------------------- ----------- alabaster 0.7.10 appdirs 1.4.3 astroid 1.4.5 Babel 2.4.0 backports.functools-lru-cache 1.4 backports.shutil-get-terminal-size 1.0.0 basemap 1.0.7 biopython 1.70 Bottleneck 1.0.0 cffi 1.11.5 configparser 3.5.0 cycler 0.10.0 Cython 0.25.2 dask 0.8.1 decorator 4.0.9 docutils 0.13.1 editdistance 0.4 egenix-mx-base 3.2.8 enum34 1.1.6 epydoc 3.0.1 flake8 3.5.0 funcsigs 0.4 functools32 3.2.3.post2 gist 2.1.7 gnuplot-py 1.8 h5py 2.7.1 hypothesis 3.7.0 imagesize 0.7.1 ipython 5.1.0 ipython-genutils 0.1.0 isort 4.2.15 Jinja2 2.9.6 Keras 2.0.3 lazy-object-proxy 1.3.1 lit 0.5.0 llvmlite 0.20.0 MarkupSafe 1.0 matplotlib 2.0.2 mccabe 0.6.1 mpi4py 3.0.0 mpmath 0.19 netCDF4 1.2.7 networkx 1.11 nose 1.3.7 numba 0.35.0 numexpr 2.6.1 numpy 1.13.3 packaging 16.8 pandas 0.21.1 pathlib2 2.1.0 periodictable 1.4.1 pexpect 4.2.1 pickleshare 0.7.4 Pillow 3.2.0 pip 9.0.1 pkgconfig 1.2.2 Pmw 2.0.0 prompt-toolkit 1.0.9 psutil 5.0.1 ptyprocess 0.5.1 py 1.4.33 pychecker 0.8.19 pycodestyle 2.3.1 pycparser 2.17 pydot 1.2.3 pyflakes 1.6.0 Pygments 2.2.0 pylint 1.6.5 Pypar 2.1.5 pyparsing 2.2.0 PySide 1.2.2 pytest 3.0.7 python-dateutil 2.5.2 pytz 2017.2 PyYAML 3.11 requests 2.14.2 rpy2 2.5.6 ScientificPython 2.8.1 scikit-image 0.12.3 scikit-learn 0.19.1 scipy 1.0.0 setuptools 35.0.2 setuptools-scm 1.15.6 simplegeneric 0.8.1 singledispatch 3.4.0.3 six 1.10.0 snowballstemmer 1.2.1 Sphinx 1.6.3 sphinx-rtd-theme 0.2.5b1 sphinxcontrib-websupport 1.0.1 subprocess32 3.2.7 sympy 1.0 tables 3.3.0 Theano 0.8.2 toml 0.9.3 traitlets 4.3.1 typing 3.6.1 virtualenv 15.1.0 wcwidth 0.1.7 wheel 0.29.0 wrapt 1.10.10
TOSS 3 Python Version 2.7.16 Site Packages
The following site packages for Python version 2.7.16 (/usr/tce/packages/python/python-2.7.16/bin/python) on TOSS 3 systems:
[lee218@rzgenie5:~]$ date Fri Mar 8 11:45:02 PST 2019 [lee218@rzgenie5:~]$ python-2.7.16 -m pip list --format=columns Package Version ---------------------------------- ----------- alabaster 0.7.12 astroid 2.2.0 atomicwrites 1.1.5 attrs 18.1.0 Babel 2.6.0 backports.functools-lru-cache 1.5 backports.shutil-get-terminal-size 1.0.0 basemap 1.2.0 biopython 1.73 Bottleneck 1.2.1 cffi 1.12.2 cloudpickle 0.5.2 configparser 3.5.1 cycler 0.10.0 Cython 0.29.5 dask 1.1.2 decorator 4.3.0 docutils 0.14 editdistance 0.4 enum34 1.1.6 epydoc 3.0.1 flake8 3.7.7 funcsigs 1.0.2 functools32 3.2.3.post2 gist 2.1.7 gnuplot-py 1.8 h5py 2.9.0 hypothesis 4.7.2 imagesize 1.1.0 ipython 5.1.0 ipython-genutils 0.2.0 isort 4.2.15 Jinja2 2.10 Keras 2.2.4 Keras-Applications 1.0.7 Keras-Preprocessing 1.0.9 kiwisolver 1.0.1 lazy-object-proxy 1.3.1 lit 0.7.1 llvmlite 0.27.1 locket 0.2.0 MarkupSafe 1.0 matplotlib 2.2.3 mccabe 0.6.1 more-itertools 4.3.0 mpi4py 3.0.1 mpmath 1.1.0 netCDF4 1.4.2 networkx 2.2 nose 1.3.7 numba 0.42.1 numexpr 2.6.9 numpy 1.16.2 packaging 17.1 pandas 0.24.1 partd 0.3.8 pathlib2 2.3.2 periodictable 1.5.0 pexpect 4.6.0 pickleshare 0.7.4 Pillow 5.4.1 pip 19.0.3 pkgconfig 1.4.0 pluggy 0.7.1 Pmw 2.0.1 prompt-toolkit 1.0.9 psutil 5.5.1 ptyprocess 0.5.1 py 1.5.4 pychecker 0.8.19 pycparser 2.18 pydot 1.4.1 pyflakes 2.1.0 Pygments 2.3.1 pylint 2.3.0 Pypar 2.1.5 pyparsing 2.3.1 pyproj 1.9.6 pyshp 2.1.0 PySide2 5.12.1 pytest 4.3.0 python-dateutil 2.5.2 pytz 2017.2 PyWavelets 0.5.2 PyYAML 3.13 requests 2.21.0 rpy2 2.8.6 scandir 1.9.0 ScientificPython 2.8.1 scikit-image 0.14.2 scikit-learn 0.20.2 scipy 1.2.1 setuptools 40.8.0 setuptools-scm 3.1.0 shiboken2 5.12.1 simplegeneric 0.8.1 singledispatch 3.4.0.3 six 1.12.0 snowballstemmer 1.2.1 Sphinx 1.8.4 sphinx-rtd-theme 0.4.3 sphinxcontrib-websupport 1.1.0 subprocess32 3.2.7 sympy 1.3 tables 3.4.4 Theano 1.0.4 toml 0.10.0 toolz 0.9.0 traitlets 4.3.1 typing 3.6.1 virtualenv 16.4.1 wcwidth 0.1.7 wheel 0.33.1 wrapt 1.10.10
TOSS 3 Python Version 3.6.0 Site Packages
The following site packages for Python version 3.6.0 (/usr/tce/packages/python/python-3.6.0/bin/python3) on TOSS 3 systems:
[lee218@rzgenie2:~]$ date Fri Feb 16 08:09:36 PST 2018 [lee218@rzgenie2:~]$ python3-3.6.0 -m pip list --format=columns Package Version ----------------- -------- alabaster 0.7.9 astroid 1.4.5 Babel 2.3.4 basemap 1.0.7 Bottleneck 1.0.0 cycler 0.10.0 Cython 0.25.2 docutils 0.12 epydoc 3.0.1 flake8 3.0.4 gist 2.1.7 h5py 2.6.0 imagesize 0.7.1 ipython 3.1.0 Jinja2 2.8 lazy-object-proxy 1.2.2 logilab-common 1.2.0 MarkupSafe 0.23 matplotlib 1.5.3 mccabe 0.5.2 mock 1.3.0 mpi4py 2.0.0 nose 1.3.7 numexpr 2.5 numpy 1.11.2 pandas 0.18.0 pbr 1.8.1 periodictable 1.4.1 pexpect 3.3 Pillow 3.2.0 pip 9.0.1 Pmw 2.0.0 pycodestyle 2.0.0 pyflakes 1.2.3 Pygments 2.1.3 pylint 1.4.3 pyparsing 2.0.3 PySide 1.2.2 python-dateutil 2.5.2 pytz 2016.6.1 rpy2 2.5.6 scikit-learn 0.17.1 scipy 0.18.1 setuptools 25.2.0 six 1.10.0 snowballstemmer 1.2.1 Sphinx 1.4.5 sphinx-rtd-theme 0.1.10a0 virtualenv 15.0.1 wheel 0.26.0 wrapt 1.10.8
TOSS 3 Python Version 3.6.4 Site Packages
The following site packages for Python version 3.6.4 (/usr/tce/packages/python/python-3.6.4/bin/python3) on TOSS 3 systems:
[lee218@rzgenie5:~]$ date Thu May 10 13:07:16 PDT 2018 [lee218@rzgenie5:~]$ python3-3.6.4 -m pip list --format=columns Package Version ---------------------------------- ------- alabaster 0.7.10 appdirs 1.4.3 astroid 1.4.5 Babel 2.4.0 backports.shutil-get-terminal-size 1.0.0 basemap 1.0.7 biopython 1.70 Bottleneck 1.0.0 configparser 3.5.0 cycler 0.10.0 Cython 0.25.2 dask 0.8.1 decorator 4.0.9 docutils 0.13.1 editdistance 0.4 enum34 1.1.6 epydoc 3.0.1 flake8 3.5.0 gist 2.1.7 h5py 2.7.1 hypothesis 3.7.0 imagesize 0.7.1 ipython 5.1.0 ipython-genutils 0.1.0 isort 4.2.15 Jinja2 2.9.6 Keras 2.0.3 lazy-object-proxy 1.3.1 lit 0.5.0 llvmlite 0.20.0 MarkupSafe 1.0 matplotlib 2.0.2 mccabe 0.6.1 mpi4py 3.0.0 mpmath 0.19 netCDF4 1.2.7 networkx 1.11 nose 1.3.7 numba 0.35.0 numexpr 2.6.1 numpy 1.13.3 packaging 16.8 pandas 0.21.1 pathlib2 2.1.0 periodictable 1.4.1 pexpect 4.2.1 pickleshare 0.7.4 Pillow 3.2.0 pip 9.0.1 pkgconfig 1.2.2 Pmw 2.0.0 prompt-toolkit 1.0.9 psutil 5.0.1 ptyprocess 0.5.1 py 1.4.33 pycodestyle 2.3.1 pydot 1.2.3 pyflakes 1.6.0 Pygments 2.2.0 pylint 1.6.5 pyparsing 2.2.0 PySide 1.2.2 pytest 3.0.7 python-dateutil 2.5.2 pytz 2017.2 PyYAML 3.11 requests 2.14.2 rpy2 2.5.6 scikit-image 0.12.3 scikit-learn 0.19.1 scipy 1.0.0 setuptools 35.0.2 simplegeneric 0.8.1 six 1.10.0 snowballstemmer 1.2.1 Sphinx 1.6.3 sphinx-rtd-theme 0.2.5b1 sphinxcontrib-websupport 1.0.1 sympy 1.0 tables 3.3.0 Theano 0.8.2 toml 0.9.3 traitlets 4.3.1 typing 3.6.1 virtualenv 15.1.0 wcwidth 0.1.7 wheel 0.29.0 wrapt 1.10.10
TOSS 3 Python Version 3.7.2 Site Packages
The following site packages for Python version 3.7.2 (/usr/tce/packages/python/python-3.7.2/bin/python3) on TOSS 3 systems
[lee218@rzgenie5:~]$ date Fri Mar 8 11:48:10 PST 2019 [lee218@rzgenie5:~]$ python3-3.7.2 -m pip list --format=columns Package Version ------------------------ ------- alabaster 0.7.12 astroid 2.2.0 atomicwrites 1.1.5 attrs 18.1.0 Babel 2.6.0 basemap 1.2.0 biopython 1.73 Bottleneck 1.2.1 cffi 1.12.2 cloudpickle 0.5.2 cycler 0.10.0 Cython 0.29.5 dask 1.1.2 decorator 4.3.0 docutils 0.14 editdistance 0.4 epydoc 3.0.1 flake8 3.7.7 gist 2.1.7 h5py 2.9.0 hypothesis 4.7.2 imagesize 1.1.0 ipython 7.3.0 ipython-genutils 0.2.0 isort 4.2.15 Jinja2 2.10 Keras 2.2.4 Keras-Applications 1.0.7 Keras-Preprocessing 1.0.9 kiwisolver 1.0.1 lazy-object-proxy 1.3.1 lit 0.7.1 llvmlite 0.27.1 locket 0.2.0 MarkupSafe 1.0 matplotlib 3.0.2 mccabe 0.6.1 more-itertools 4.3.0 mpi4py 3.0.1 mpmath 1.1.0 netCDF4 1.4.2 networkx 2.2 nose 1.3.7 numba 0.42.1 numexpr 2.6.9 numpy 1.16.2 packaging 17.1 pandas 0.24.1 partd 0.3.8 periodictable 1.5.0 pexpect 4.6.0 pickleshare 0.7.4 Pillow 5.4.1 pip 19.0.3 pkgconfig 1.4.0 pluggy 0.7.1 Pmw 2.0.1 prompt-toolkit 1.0.9 psutil 5.5.1 ptyprocess 0.5.1 py 1.5.4 pycairo 1.17.1 pycparser 2.18 pydot 1.4.1 pyflakes 2.1.0 Pygments 2.3.1 PyGObject 3.28.3 pylint 2.3.0 pyparsing 2.3.1 pyproj 1.9.6 pyshp 2.1.0 PySide2 5.12.1 pytest 4.3.0 python-dateutil 2.5.2 pytz 2017.2 PyWavelets 0.5.2 PyYAML 3.13 requests 2.21.0 rpy2 3.0.0 scikit-image 0.14.2 scikit-learn 0.20.2 scipy 1.2.1 setuptools 40.8.0 setuptools-scm 3.1.0 shiboken2 5.12.1 simplegeneric 0.8.1 six 1.12.0 snowballstemmer 1.2.1 Sphinx 1.8.4 sphinx-rtd-theme 0.4.3 sphinxcontrib-websupport 1.1.0 sympy 1.3 tables 3.4.4 Theano 1.0.4 toml 0.10.0 toolz 0.9.0 traitlets 4.3.1 virtualenv 16.4.1 wcwidth 0.1.7 wheel 0.33.1 wrapt 1.10.10 xdot 1.0
TOSS 3 Python Version 3.8.2 Site Packages
The following site packages for Python version 3.8.2 (/usr/tce/packages/python/python-3.8.2/bin/python3) on TOSS 3 systems
[lee218@rzgenie2:~]$ date Tue Aug 11 10:08:12 PDT 2020 [lee218@rzgenie2:~]$ python3-3.8.2 -m pip list --format=columns Package Version ----------------------------- ----------- alabaster 0.7.12 appdirs 1.4.3 asn1crypto 0.24.0 astroid 2.2.0 atomicwrites 1.3.0 attrs 19.2.0 Babel 2.7.0 backcall 0.1.0 bandit 1.6.2 basemap 1.2.0 biopython 1.73 black 19.3b0 bokeh 2.0.2 boto3 1.10.44 botocore 1.13.44 Bottleneck 1.2.1 cached-property 1.5.1 Cartopy 0.18.0 certifi 2019.9.11 cffi 1.14.0 cftime 1.0.3.4 chardet 3.0.4 Click 7.0 cloudpickle 1.2.1 colorama 0.4.1 colorcet 2.0.2 coverage 4.5.4 cryptography 2.7 cycler 0.10.0 Cython 0.29.14 dask 1.2.2 decorator 4.4.0 dill 0.3.1.1 distributed 2.10.0 docutils 0.15.2 entrypoints 0.3 epydoc 3.0.1 flake8 3.7.8 future 0.18.2 GDAL 3.0.4 gist 2.1.7 gitdb 4.0.4 GitPython 3.1.1 gym 0.17.1 h5py 2.10.0 HeapDict 1.0.1 holoviews 1.13.2 hypothesis 4.41.2 idna 2.8 imageio 2.5.0 imagesize 1.1.0 ipykernel 5.3.0 ipython 7.3.0 ipython-genutils 0.2.0 isort 4.3.20 Jinja2 2.10.3 jmespath 0.9.4 joblib 0.14.0 jsonschema 3.0.1 jupyter-client 6.1.5 jupyter-core 4.6.3 Keras 2.2.4 Keras-Applications 1.0.8 Keras-Preprocessing 1.1.0 kiwisolver 1.1.0 lazy-object-proxy 1.3.1 lit 0.7.1 llvmlite 0.31.0 locket 0.2.0 Markdown 3.2.1 MarkupSafe 1.1.1 matplotlib 3.2.0 mccabe 0.6.1 meson 0.49.1 more-itertools 7.2.0 mpi4py 3.0.3 mpmath 1.1.0 msgpack 0.6.2 mypy 0.740 mypy-extensions 0.4.3 netCDF4 1.4.2 networkx 2.2 nose 1.3.7 numba 0.48.0 numexpr 2.7.0 numpy 1.18.1 OWSLib 0.17.1 packaging 19.2 pandas 0.25.1 panel 0.9.5 param 1.9.3 partd 0.3.8 pbr 5.4.5 periodictable 1.5.0 pexpect 4.7.0 pickleshare 0.7.5 Pillow 7.0.0 pip 19.3 pkgconfig 1.5.1 plotly 2.2.0 pluggy 0.13.0 Pmw 2.0.1 prompt-toolkit 2.0.9 psutil 5.6.3 ptyprocess 0.6.0 py 1.8.0 pybind11 2.4.3 pycairo 1.18.1 pycodestyle 2.5.0 pycparser 2.19 pyct 0.4.6 pydot 1.4.1 pyepsg 0.3.2 pyflakes 2.1.1 pyglet 1.5.0 Pygments 2.4.2 PyGObject 3.28.3 pylint 2.3.0 pyparsing 2.4.2 pyproj 2.2.0 PyQt5 5.14.1 PyQt5-sip 12.7.1 pyrsistent 0.15.7 pyshp 2.1.0 PySide2 5.14.1 pytest 5.2.1 pytest-runner 5.1 python-dateutil 2.8.0 python-Levenshtein 0.12.0 pytz 2019.3 pyviz-comms 0.7.4 PyWavelets 0.5.2 PyYAML 5.1.2 pyzmq 19.0.1 requests 2.22.0 rpy2 3.0.0 s3transfer 0.2.1 scikit-image 0.14.2 scikit-learn 0.22.1 scipy 1.4.1 seaborn 0.10.1 setuptools 41.4.0 Shapely 1.6.4.post2 shiboken2 5.14.1 simplegeneric 0.8.1 six 1.12.0 smmap 3.0.2 snowballstemmer 2.0.0 sortedcontainers 2.1.0 Sphinx 2.2.0 sphinx-rtd-theme 0.4.3 sphinxcontrib-applehelp 1.0.1 sphinxcontrib-devhelp 1.0.1 sphinxcontrib-htmlhelp 1.0.2 sphinxcontrib-jsmath 1.0.1 sphinxcontrib-programoutput 0.15 sphinxcontrib-qthelp 1.0.2 sphinxcontrib-serializinghtml 1.1.3 stevedore 1.32.0 sympy 1.4 tblib 1.4.0 Theano 1.0.4 toml 0.10.0 toolz 0.9.0 tornado 6.0.3 tqdm 4.45.0 traitlets 4.3.3 typed-ast 1.4.0 typing-extensions 3.7.4 urllib3 1.25.6 virtualenv 16.7.6 wcwidth 0.1.7 wheel 0.33.4 wrapt 1.11.2 xdot 1.0 xlrd 1.2.0 zict 1.0.0
CORAL EA and CORAL Python Version 2.7.13 Site Packages
The following site packages for Python version 2.7.13 (/usr/tcetmp/packages/python/python-2.7.13/bin/python) on CORAL EA and CORAL systems:
[lee218@rzmanta23:~]$ date Fri Feb 16 08:19:52 PST 2018 [lee218@rzmanta23:~]$ python-2.7.13 -m pip list --format=columns Package Version ---------------------------------- ----------- alabaster 0.7.10 appdirs 1.4.3 astroid 1.4.5 Babel 2.4.0 backports.shutil-get-terminal-size 1.0.0 biopython 1.65 Bottleneck 1.0.0 configparser 3.5.0 cycler 0.10.0 dask 0.8.1 decorator 4.0.9 docutils 0.13.1 egenix-mx-base 3.2.8 enum34 1.1.6 epydoc 3.0.1 flake8 3.0.4 functools32 3.2.3.post2 h5py 2.6.0 imagesize 0.7.1 ipython 5.1.0 ipython-genutils 0.1.0 Jinja2 2.9.6 logilab-common 1.2.0 MarkupSafe 1.0 matplotlib 2.0.2 mccabe 0.5.2 mpi4py 2.0.0 networkx 1.11 numexpr 2.6.1 numpy 1.12.1 packaging 16.8 pandas 0.19.0 pathlib2 2.1.0 pexpect 4.2.1 pickleshare 0.7.4 Pillow 3.2.0 pip 9.0.1 prompt-toolkit 1.0.9 protobuf 3.0.0b2 psutil 5.0.1 ptyprocess 0.5.1 pycodestyle 2.0.0 pyflakes 1.2.3 Pygments 2.2.0 pylint 1.4.3 pyparsing 2.2.0 PySide 1.2.2 python-dateutil 2.5.2 pytz 2017.2 PyYAML 3.11 requests 2.14.2 rpy2 2.5.6 scikit-image 0.12.3 scikit-learn 0.18.1 scipy 0.19.0 setuptools 35.0.2 simplegeneric 0.8.1 six 1.10.0 snowballstemmer 1.2.1 Sphinx 1.6.1 sphinx-rtd-theme 0.2.5b1 sphinxcontrib-websupport 1.0.1 subprocess32 3.2.7 traitlets 4.3.1 typing 3.6.1 virtualenv 15.1.0 wcwidth 0.1.7
CORAL EA and CORAL Python Version 2.7.14 Site Packages
The following site packages for Python version 2.7.14 (/usr/tcetmp/packages/python/python-2.7.14/bin/python) on CORAL EA and CORAL systems:
[lee218@rzmanta23:~]$ date Thu May 10 13:13:44 PDT 2018 [lee218@rzmanta23:~]$ python-2.7.14 -m pip list --format=columns Package Version ---------------------------------- ----------- alabaster 0.7.10 appdirs 1.4.3 astroid 1.4.5 Babel 2.4.0 backports.shutil-get-terminal-size 1.0.0 basemap 1.0.7 biopython 1.70 Bottleneck 1.0.0 cffi 1.11.5 configparser 3.5.0 cycler 0.10.0 Cython 0.25.2 dask 0.8.1 decorator 4.0.9 docutils 0.13.1 egenix-mx-base 3.2.8 enum34 1.1.6 epydoc 3.0.1 flake8 3.5.0 funcsigs 0.4 functools32 3.2.3.post2 gnuplot-py 1.8 h5py 2.7.1 hypothesis 3.7.0 imagesize 0.7.1 ipython 5.1.0 ipython-genutils 0.1.0 Jinja2 2.9.6 Keras 2.0.3 lit 0.5.0 llvmlite 0.20.0 MarkupSafe 1.0 matplotlib 2.0.2 mccabe 0.6.1 mpi4py 3.0.0 mpmath 0.19 netCDF4 1.2.7 networkx 1.11 nose 1.3.7 numba 0.35.0 numexpr 2.6.1 numpy 1.13.3 packaging 16.8 pandas 0.21.1 pathlib2 2.1.0 periodictable 1.4.1 pexpect 4.2.1 pickleshare 0.7.4 Pillow 3.2.0 pip 9.0.1 Pmw 2.0.0 prompt-toolkit 1.0.9 psutil 5.0.1 ptyprocess 0.5.1 py 1.4.33 pychecker 0.8.19 pycodestyle 2.3.1 pycparser 2.17 pydot 1.2.3 pyflakes 1.6.0 Pygments 2.2.0 pylint 1.6.5 pyparsing 2.2.0 PySide 1.2.2 pytest 3.0.7 python-dateutil 2.5.2 pytz 2017.2 PyYAML 3.11 requests 2.14.2 rpy2 2.5.6 ScientificPython 2.8.1 scikit-image 0.12.3 scikit-learn 0.18.1 scipy 1.0.0 setuptools 35.0.2 simplegeneric 0.8.1 singledispatch 3.4.0.3 six 1.10.0 snowballstemmer 1.2.1 Sphinx 1.6.3 sphinx-rtd-theme 0.2.5b1 sphinxcontrib-websupport 1.0.1 subprocess32 3.2.7 sympy 1.0 Theano 0.8.2 traitlets 4.3.1 typing 3.6.1 virtualenv 15.1.0 wcwidth 0.1.7 wheel 0.29.0
CORAL EA and CORAL Python Version 2.7.16 Site Packages
The following site packages for Python version 2.7.16 (/usr/tcetmp/packages/python/python-2.7.16/bin/python) on CORAL EA and CORAL systems:
[lee218@rzansel61:~]$ date Fri Mar 8 11:48:34 PST 2019 [lee218@rzansel61:~]$ python-2.7.16 -m pip list --format=columns Package Version ---------------------------------- ----------- alabaster 0.7.12 astroid 2.2.0 atomicwrites 1.1.5 attrs 18.1.0 Babel 2.6.0 backports.shutil-get-terminal-size 1.0.0 biopython 1.73 Bottleneck 1.2.1 cffi 1.12.2 cloudpickle 0.5.2 configparser 3.5.1 cycler 0.10.0 Cython 0.29.5 dask 1.1.2 decorator 4.3.0 docutils 0.14 editdistance 0.4 enum34 1.1.6 epydoc 3.0.1 flake8 3.7.7 funcsigs 1.0.2 functools32 3.2.3.post2 gnuplot-py 1.8 h5py 2.9.0 hypothesis 4.7.2 imagesize 1.1.0 ipython 5.1.0 ipython-genutils 0.2.0 isort 4.2.15 Jinja2 2.10 Keras 2.2.4 Keras-Applications 1.0.7 Keras-Preprocessing 1.0.9 kiwisolver 1.0.1 lazy-object-proxy 1.3.1 lit 0.7.1 locket 0.2.0 MarkupSafe 1.0 matplotlib 2.2.3 mccabe 0.6.1 more-itertools 4.3.0 mpi4py 3.0.1 mpmath 1.1.0 netCDF4 1.4.2 networkx 2.2 nose 1.3.7 numexpr 2.6.9 numpy 1.16.2 packaging 17.1 pandas 0.24.1 partd 0.3.8 pathlib2 2.3.2 periodictable 1.5.0 pexpect 4.6.0 pickleshare 0.7.4 Pillow 5.4.1 pip 19.0.3 pkgconfig 1.4.0 pluggy 0.7.1 Pmw 2.0.1 prompt-toolkit 1.0.9 psutil 5.5.1 ptyprocess 0.5.1 py 1.5.4 pychecker 0.8.19 pycparser 2.18 pydot 1.4.1 pyflakes 2.1.0 Pygments 2.3.1 pylint 2.3.0 Pypar 2.1.5 pyparsing 2.3.1 pytest 4.3.0 python-dateutil 2.5.2 pytz 2017.2 PyYAML 3.13 requests 2.21.0 rpy2 2.8.6 scandir 1.9.0 ScientificPython 2.8.1 scikit-image 0.14.2 scikit-learn 0.20.2 scipy 1.2.1 setuptools 40.8.0 setuptools-scm 3.1.0 simplegeneric 0.8.1 singledispatch 3.4.0.3 six 1.12.0 snowballstemmer 1.2.1 Sphinx 1.8.4 sphinx-rtd-theme 0.4.3 sphinxcontrib-websupport 1.1.0 subprocess32 3.2.7 sympy 1.3 Theano 1.0.4 toml 0.10.0 toolz 0.9.0 traitlets 4.3.1 typing 3.6.1 virtualenv 16.4.1 wcwidth 0.1.7 wheel 0.33.1 wrapt 1.10.10
CORAL EA and CORAL Python Version 3.6.4 Site Packages
The following site packages for Python version 3.6.4 (/usr/tcetmp/packages/python/python-3.6.4/bin/python3) on CORAL EA and CORAL systems:
[lee218@rzmanta23:~]$ date Thu May 10 13:14:42 PDT 2018 [lee218@rzmanta23:~]$ python3-3.6.4 -m pip list --format=columns Package Version ---------------------------------- ------- alabaster 0.7.10 appdirs 1.4.3 astroid 1.4.5 Babel 2.4.0 backports.shutil-get-terminal-size 1.0.0 biopython 1.70 Bottleneck 1.0.0 cffi 1.11.5 configparser 3.5.0 cycler 0.10.0 Cython 0.25.2 dask 0.8.1 decorator 4.0.9 docutils 0.13.1 enum34 1.1.6 epydoc 3.0.1 flake8 3.5.0 h5py 2.7.1 hypothesis 3.7.0 imagesize 0.7.1 ipython 5.1.0 ipython-genutils 0.1.0 Jinja2 2.9.6 Keras 2.0.3 lit 0.5.0 llvmlite 0.20.0 MarkupSafe 1.0 matplotlib 2.0.2 mccabe 0.6.1 mpi4py 3.0.0 mpmath 0.19 netCDF4 1.2.7 networkx 1.11 nose 1.3.7 numba 0.35.0 numexpr 2.6.1 numpy 1.13.3 packaging 16.8 pandas 0.21.1 pathlib2 2.1.0 periodictable 1.4.1 pexpect 4.2.1 pickleshare 0.7.4 Pillow 3.2.0 pip 9.0.1 Pmw 2.0.0 prompt-toolkit 1.0.9 psutil 5.0.1 ptyprocess 0.5.1 py 1.4.33 pycodestyle 2.3.1 pycparser 2.17 pydot 1.2.3 pyflakes 1.6.0 Pygments 2.2.0 pylint 1.6.5 pyparsing 2.2.0 PySide 1.2.2 pytest 3.0.7 python-dateutil 2.5.2 pytz 2017.2 PyYAML 3.11 requests 2.14.2 rpy2 2.5.6 scikit-image 0.12.3 scikit-learn 0.18.1 scipy 1.0.0 setuptools 35.0.2 simplegeneric 0.8.1 six 1.10.0 snowballstemmer 1.2.1 Sphinx 1.6.3 sphinx-rtd-theme 0.2.5b1 sphinxcontrib-websupport 1.0.1 sympy 1.0 Theano 0.8.2 traitlets 4.3.1 typing 3.6.1 virtualenv 15.1.0 wcwidth 0.1.7 wheel 0.29.0
CORAL EA and CORAL Python Version 3.7.2 Site Packages
The following site packages for Python version 3.7.2 (/usr/tcetmp/packages/python/python-3.7.2/bin/python3) on CORAL EA and CORAL systems:
[lee218@rzansel61:~]$ date Fri Mar 8 11:48:52 PST 2019 [lee218@rzansel61:~]$ python3-3.7.2 -m pip list --format=columns Package Version ------------------------ ------- alabaster 0.7.12 astroid 2.2.0 atomicwrites 1.1.5 attrs 18.1.0 Babel 2.6.0 biopython 1.73 Bottleneck 1.2.1 cffi 1.12.2 cloudpickle 0.5.2 cycler 0.10.0 Cython 0.29.5 dask 1.1.2 decorator 4.3.0 docutils 0.14 editdistance 0.4 epydoc 3.0.1 flake8 3.7.7 h5py 2.9.0 hypothesis 4.7.2 imagesize 1.1.0 ipython 7.3.0 ipython-genutils 0.2.0 isort 4.2.15 Jinja2 2.10 Keras 2.2.4 Keras-Applications 1.0.7 Keras-Preprocessing 1.0.9 kiwisolver 1.0.1 lazy-object-proxy 1.3.1 lit 0.7.1 locket 0.2.0 MarkupSafe 1.0 matplotlib 3.0.2 mccabe 0.6.1 more-itertools 4.3.0 mpi4py 3.0.1 mpmath 1.1.0 netCDF4 1.4.2 networkx 2.2 nose 1.3.7 numexpr 2.6.9 numpy 1.16.2 packaging 17.1 pandas 0.24.1 partd 0.3.8 periodictable 1.5.0 pexpect 4.6.0 pickleshare 0.7.4 Pillow 5.4.1 pip 19.0.3 pkgconfig 1.4.0 pluggy 0.7.1 Pmw 2.0.1 prompt-toolkit 1.0.9 psutil 5.5.1 ptyprocess 0.5.1 py 1.5.4 pycairo 1.17.1 pycparser 2.18 pydot 1.4.1 pyflakes 2.1.0 Pygments 2.3.1 PyGObject 3.28.3 pylint 2.3.0 pyparsing 2.3.1 pytest 4.3.0 python-dateutil 2.5.2 pytz 2017.2 PyYAML 3.13 requests 2.21.0 rpy2 3.0.0 scikit-image 0.14.2 scikit-learn 0.20.2 scipy 1.2.1 setuptools 40.8.0 setuptools-scm 3.1.0 simplegeneric 0.8.1 six 1.12.0 snowballstemmer 1.2.1 Sphinx 1.8.4 sphinx-rtd-theme 0.4.3 sphinxcontrib-websupport 1.1.0 sympy 1.3 tables 3.4.4 Theano 1.0.4 toml 0.10.0 toolz 0.9.0 traitlets 4.3.1 virtualenv 16.4.1 wcwidth 0.1.7 wheel 0.33.1 wrapt 1.10.10 xdot 1.0
CORAL EA and CORAL Python Version 3.8.2 Site Packages
The following site packages for Python version 3.8.2 (/usr/tcetmp/packages/python/python-3.8.2/bin/python3) on CORAL EA and CORAL systems:
[lee218@rzansel61:~]$ date Tue Aug 11 10:23:07 PDT 2020 [lee218@rzansel61:~]$ python3-3.8.2 -m pip list --format=columns Package Version ----------------------------- ----------- alabaster 0.7.12 appdirs 1.4.3 asn1crypto 0.24.0 astroid 2.2.0 atomicwrites 1.3.0 attrs 19.2.0 Babel 2.7.0 backcall 0.2.0 bandit 1.6.2 basemap 1.2.0 biopython 1.73 black 19.3b0 bokeh 2.0.2 boto3 1.10.44 botocore 1.13.44 Bottleneck 1.2.1 cached-property 1.5.1 Cartopy 0.18.0 certifi 2019.9.11 cffi 1.14.0 cftime 1.0.3.4 chardet 3.0.4 Click 7.0 cloudpickle 1.2.1 colorama 0.4.1 colorcet 2.0.2 coverage 4.5.4 cryptography 2.7 cycler 0.10.0 Cython 0.29.14 dask 1.2.2 decorator 4.4.0 dill 0.3.1.1 distributed 2.10.0 docutils 0.15.2 entrypoints 0.3 epydoc 3.0.1 flake8 3.7.8 future 0.18.2 GDAL 3.0.4 gist 2.1.7 gitdb 4.0.4 GitPython 3.1.1 gym 0.17.1 h5py 2.10.0 HeapDict 1.0.1 holoviews 1.13.2 hypothesis 4.41.2 idna 2.8 imageio 2.5.0 imagesize 1.1.0 ipykernel 5.3.0 ipython 7.16.1 ipython-genutils 0.2.0 isort 4.3.20 jedi 0.17.1 Jinja2 2.10.3 jmespath 0.9.4 joblib 0.14.0 jsonschema 3.0.1 jupyter-client 6.1.5 jupyter-core 4.6.3 Keras 2.2.4 Keras-Applications 1.0.8 Keras-Preprocessing 1.1.0 kiwisolver 1.1.0 lazy-object-proxy 1.3.1 lit 0.7.1 locket 0.2.0 Markdown 3.2.1 MarkupSafe 1.1.1 matplotlib 3.2.1 mccabe 0.6.1 meson 0.49.1 more-itertools 7.2.0 mpi4py 3.0.3 mpmath 1.1.0 msgpack 0.6.2 mypy 0.740 mypy-extensions 0.4.3 netCDF4 1.4.2 networkx 2.2 nose 1.3.7 numexpr 2.7.0 numpy 1.18.2 OWSLib 0.17.1 packaging 19.2 pandas 0.25.1 panel 0.9.5 param 1.9.3 parso 0.7.0 partd 0.3.8 pbr 5.4.5 periodictable 1.5.0 pexpect 4.8.0 pickleshare 0.7.5 Pillow 7.0.0 pip 19.3 pkgconfig 1.5.1 plotly 2.2.0 pluggy 0.13.0 Pmw 2.0.1 prompt-toolkit 3.0.5 psutil 5.6.3 ptyprocess 0.6.0 py 1.8.0 pybind11 2.4.3 pycairo 1.18.1 pycodestyle 2.5.0 pycparser 2.19 pyct 0.4.6 pydot 1.4.1 pyepsg 0.3.2 pyflakes 2.1.1 pyglet 1.5.0 Pygments 2.4.2 PyGObject 3.28.3 pylint 2.3.0 pyparsing 2.4.2 pyproj 2.2.0 pyrsistent 0.15.7 pyshp 2.1.0 pytest 5.2.1 pytest-runner 5.1 python-dateutil 2.8.0 python-Levenshtein 0.12.0 pytz 2019.3 pyviz-comms 0.7.4 PyWavelets 0.5.2 PyYAML 5.1.2 pyzmq 19.0.1 requests 2.22.0 rpy2 3.0.0 s3transfer 0.2.1 scikit-image 0.14.2 scikit-learn 0.22.1 scipy 1.4.1 seaborn 0.10.1 setuptools 41.4.0 Shapely 1.6.4.post2 six 1.12.0 smmap 3.0.2 snowballstemmer 2.0.0 sortedcontainers 2.1.0 Sphinx 2.2.0 sphinx-rtd-theme 0.4.3 sphinxcontrib-applehelp 1.0.1 sphinxcontrib-devhelp 1.0.1 sphinxcontrib-htmlhelp 1.0.2 sphinxcontrib-jsmath 1.0.1 sphinxcontrib-programoutput 0.15 sphinxcontrib-qthelp 1.0.2 sphinxcontrib-serializinghtml 1.1.3 stevedore 1.32.0 sympy 1.4 tblib 1.4.0 Theano 1.0.4 toml 0.10.0 toolz 0.9.0 tornado 6.0.3 tqdm 4.45.0 traitlets 4.3.3 typed-ast 1.4.0 typing-extensions 3.7.4 urllib3 1.25.6 virtualenv 16.7.6 wcwidth 0.1.7 wheel 0.33.4 wrapt 1.11.2 xdot 1.0 xlrd 1.2.0 zict 1.0.0